VIRsiRNAdb

../../tmp/servers/virsirnadb/1174141332
Result for your query siRNA sequence

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Strain name	Start	Alignment	End	% Identity
Query	virsi1253	1	`tcaatatgctaaaacgcgg`	19
D00246.1	KUNCG Kunjin virus gene for polyprotein (C, prM, E, NS1, NS2A, NS2B, N	116	`...................`	134	100
AF202541.1	West Nile virus strain HNY1999 polyprotein (C, prM, E, NS1, NS2a, NS2	95	`...................`	113	100
AF206518.2	West Nile virus isolate 2741, complete genome	119	`...................`	137	100
AF260967.1	West Nile virus strain NY99-eqhs, complete genome	137	`...................`	155	100
AF260968.1	West Nile virus strain Eg101, complete genome	137	`...................`	155	100
AF260969.1	West Nile virus strain RO97-50, complete genome	137	`...................`	155	100
AF196835.2	West Nile virus strain NY99-flamingo382-99, complete genome	137	`...................`	155	100
AF317203.1	West Nile virus VLG-4 polyprotein precursor, gene, complete cds	105	`...................`	123	100
AF481864.1	West Nile virus strain IS-98 STD, complete genome	137	`...................`	155	100
AF404753.1	West Nile virus isolate WN MD 2000-crow265, complete genome	137	`...................`	155	100
AF404754.1	West Nile virus isolate WN NJ 2000 MQ5488, complete genome	137	`...................`	155	100
AF404755.1	West Nile virus isolate WN NY 2000-grouse3282, complete genome	137	`...................`	155	100
AF404756.1	West Nile virus isolate WN NY 2000-crow3356, complete genome	137	`...................`	155	100
AF404757.1	West Nile virus isolate WN Italy 1998-equine, complete genome	137	`...................`	155	100
AF533540.1	West Nile virus polyprotein precursor, gene, complete cds	137	`...................`	155	100
AY262283.1	West Nile virus isolate KN3829 polyprotein gene, complete cds	101	`...................`	119	100
AY277252.1	West Nile virus isolate LEIV-Vlg99-27889, complete genome	137	`...................`	155	100
AY278441.1	West Nile virus isolate Ast99-901, complete genome	137	`...................`	155	100
AY278442.1	West Nile virus isolate LEIV-Vlg00-27924, complete genome	137	`...................`	155	100
AY274504.1	Kunjin virus clone FLSDX polyprotein mRNA, complete cds	137	`...................`	155	100
AY274505.1	Kunjin virus clone pAKUN polyprotein mRNA, complete cds	137	`...................`	155	100
AY268132.1	West Nile virus strain PaAn001 polyprotein (pol) gene, complete cds	117	`...................`	135	100
AY268133.1	West Nile virus strain PaH001 polyprotein (pol) gene, complete cds	117	`...................`	135	100
AY289214.1	West Nile virus strain TVP 8533 complete genome	137	`...................`	155	100
AY490240.2	West Nile virus strain Chin-01, complete genome	137	`...................`	155	100
AB185916.1	West Nile virus gene for polyprotein precursor protein, complete cds,	137	`...................`	155	100
AB185917.1	West Nile virus gene for polyprotein precursor protein, complete cds,	137	`...................`	155	100
AB185914.2	West Nile virus gene for polyprotein precursor protein, complete cds,	137	`...................`	155	100
AB185915.2	West Nile virus gene for polyprotein precursor protein, complete cds,	137	`...................`	155	100
AY701412.1	West Nile virus strain 96-111 polyprotein gene, complete cds	95	`...................`	113	100
AY701413.1	West Nile virus strain 04.05 polyprotein gene, complete cds	95	`...................`	113	100
AY688948.1	West Nile virus strain Sarafend, complete genome	137	`...................`	155	100
AY603654.1	West Nile virus strain EthAn4766, complete genome	137	`...................`	155	100
AY712945.1	West Nile virus isolate Bird 1153, complete genome	137	`...................`	155	100
AY712946.1	West Nile virus isolate Bird 1171, complete genome	137	`...................`	155	100
AY712947.1	West Nile virus isolate Bird 1461, complete genome	137	`...................`	155	100
AY712948.1	West Nile virus isolate Mosquito v4369, complete genome	137	`...................`	155	100
AY646354.1	West Nile virus from USA, complete genome	137	`...................`	155	100
AY660002.1	West Nile virus isolate Mex03 from Mexico, complete genome	137	`...................`	155	100
AY532665.1	West Nile virus strain B956 polyprotein gene, complete genome	137	`...................`	155	100
AY795965.1	West Nile virus isolate ARC10, complete genome	137	`...................`	155	100
DQ066423.1	West Nile virus strain 385-99 isolate hamster passage strain 9317B, c	137	`...................`	155	100
DQ005530.1	West Nile virus isolate FDA-BSL5-2003, complete genome	137	`...................`	155	100
DQ080051.1	West Nile virus isolate A-AZ-03-1623 polyprotein precursor, gene, com	137	`...................`	155	100
DQ080052.1	West Nile virus isolate B-AZ-03-1681 polyprotein precursor, gene, com	137	`...................`	155	100
DQ080053.1	West Nile virus isolate C-AZ-03 03-1799 polyprotein precursor, gene,	137	`...................`	155	100
DQ080054.1	West Nile virus isolate E-CA-03 GRLA-1260 polyprotein precursor, gene	137	`...................`	155	100
DQ080055.1	West Nile virus isolate F-CA-03 IMPR 102 polyprotein precursor, gene,	137	`...................`	155	100
DQ080056.1	West Nile virus isolate G-CA-03 IMPR-1075 polyprotein precursor, gene	137	`...................`	155	100
DQ080057.1	West Nile virus isolate I-CA-03 Arcadia-S0331532 polyprotein precurso	137	`...................`	155	100
DQ080058.1	West Nile virus isolate J-CA-03 Arcadia-S0334814 polyprotein precurso	137	`...................`	155	100
DQ080059.1	West Nile virus isolate L-CA-04 SAC-04-7168 polyprotein precursor, ge	137	`...................`	155	100
DQ080060.1	West Nile virus isolate WNVCc polyprotein precursor, gene, complete c	108	`...................`	126	100
DQ080061.1	West Nile virus isolate TWN496 polyprotein precursor, gene, complete	108	`...................`	126	100
DQ080062.1	West Nile virus isolate TWN165 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080063.1	West Nile virus isolate TVP9223 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080064.1	West Nile virus isolate TVP9222 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080065.1	West Nile virus isolate TVP9221 polyprotein precursor, gene, complete	103	`...................`	121	100
DQ080066.1	West Nile virus isolate TVP9220 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080067.1	West Nile virus isolate TVP9219 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080068.1	West Nile virus isolate TVP9218 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080069.1	West Nile virus isolate TVP9117 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080070.1	West Nile virus isolate TVP9115 polyprotein precursor, gene, complete	109	`...................`	127	100
DQ080071.1	West Nile virus isolate FL234 polyprotein precursor, gene, complete c	108	`...................`	126	100
DQ080072.1	West Nile virus isolate FL232 polyprotein precursor, gene, complete c	108	`...................`	126	100
DQ116961.1	West Nile virus isolate goshawk-Hungary/04, complete genome	137	`...................`	155	100
AY842931.3	West Nile virus strain 385-99, complete genome	137	`...................`	155	100
DQ164186.1	West Nile virus isolate NY 2002 Queens, complete genome	137	`...................`	155	100
DQ164187.1	West Nile virus isolate NY 2002 Broome, complete genome	137	`...................`	155	100
DQ164188.1	West Nile virus isolate NY 2003 Westchester, complete genome	137	`...................`	155	100
DQ164189.1	West Nile virus isolate NY 2003 Albany, complete genome	137	`...................`	155	100
DQ164190.1	West Nile virus isolate NY 2003 Suffolk, complete genome	137	`...................`	155	100
DQ164191.1	West Nile virus isolate NY 2003 Chautauqua, complete genome	137	`...................`	155	100
DQ164192.1	West Nile virus isolate NY 2003 Rockland, complete genome	137	`...................`	155	100
DQ164193.1	West Nile virus isolate NY 2002 Clinton, complete genome	137	`...................`	155	100
DQ164194.1	West Nile virus isolate NY 2001 Suffolk, complete genome	137	`...................`	155	100
DQ164195.1	West Nile virus isolate NY 2002 Nassau, complete genome	137	`...................`	155	100
DQ164196.1	West Nile virus isolate GA 2002 1, complete genome	137	`...................`	155	100
DQ164197.1	West Nile virus isolate GA 2002 2, complete genome	137	`...................`	155	100
DQ164198.1	West Nile virus isolate TX 2002 1, complete genome	137	`...................`	155	100
DQ164199.1	West Nile virus isolate TX 2003, complete genome	137	`...................`	155	100
DQ164200.1	West Nile virus isolate IN 2002, complete genome	137	`...................`	155	100
DQ164201.1	West Nile virus isolate AZ 2004, complete genome	137	`...................`	155	100
DQ164202.1	West Nile virus isolate OH 2002, complete genome	137	`...................`	155	100
DQ164203.1	West Nile virus isolate CO 2003 2, complete genome	137	`...................`	155	100
DQ164204.1	West Nile virus isolate CO 2003 1, complete genome	137	`...................`	155	100
DQ164205.1	West Nile virus isolate TX 2002 2, complete genome	137	`...................`	155	100
DQ164206.1	West Nile virus isolate TX 2004 Harris 4, complete genome	137	`...................`	155	100
DQ176637.1	West Nile virus strain TX 2002-HC, complete genome	80	`...................`	98	100
AY848697.2	West Nile virus strain 385-99 isolate hamster passage strain TVP-9376	137	`...................`	155	100
AY848695.2	West Nile virus strain 385-99 isolate hamster passage strain 9317A, c	137	`...................`	155	100
AY848696.2	West Nile virus strain 385-99 isolate hamster passage strain 9317E, c	137	`...................`	155	100
DQ256376.1	West Nile virus strain 804994, complete genome	137	`...................`	155	100
DQ318019.1	West Nile virus strain ArD76104, complete genome	137	`...................`	155	100
DQ318020.1	Wets NIle virus strain ArB3573/82, complete genome	137	`...................`	155	100
DQ374650.1	West Nile virus isolate Ast02-3-717, complete genome	114	`...................`	132	100
DQ374651.1	West Nile virus isolate Ast02-3-570, complete genome	114	`...................`	132	100
DQ374652.1	West Nile virus isolate Ast04-2-824A,, complete genome	114	`...................`	132	100
DQ374653.1	West Nile virus isolate Ast02-2-25, complete genome	114	`...................`	132	100
DQ377178.1	West Nile virus isolate Ast02-2-26, complete genome	114	`...................`	132	100
DQ377179.1	West Nile virus isolate Ast02-2-298, complete genome	114	`...................`	132	100
DQ377180.1	West Nile virus isolate Ast02-3-208, complete genome	114	`...................`	132	100
DQ118127.1	West Nile virus isolate goose-Hungary/03, complete genome	137	`...................`	155	100
DQ411029.1	West Nile virus isolate Ast01-66, complete genome	114	`...................`	132	100
DQ411030.1	West Nile virus isolate Ast01-182, complete genome	114	`...................`	132	100
DQ411031.1	West Nile virus isolate Ast01-187, complete genome	114	`...................`	132	100
DQ411032.1	West Nile virus isolate Ast02-3-146, complete genome	114	`...................`	132	100
DQ411033.1	West Nile virus isolate Ast02-3-165, complete genome	114	`...................`	132	100
DQ411034.1	West Nile virus isolate Ast02-2-691, complete genome	114	`...................`	132	100
DQ411035.1	West Nile virus isolate Ast02-2-692, complete genome	114	`...................`	132	100
DQ431693.1	West Nile virus isolate 03-20TX polyprotein precursor, gene, complete	41	`...................`	59	100
DQ431694.1	West Nile virus isolate 03-22TX polyprotein precursor, gene, complete	41	`...................`	59	100
DQ431695.1	West Nile virus isolate 03-82IL polyprotein precursor, gene, complete	41	`...................`	59	100
DQ431696.1	West Nile virus isolate 03-104WI polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431697.1	West Nile virus isolate 03-113FL polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431698.1	West Nile virus isolate 03-120FL polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431699.1	West Nile virus isolate 03-124FL polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431700.1	West Nile virus isolate 04-213CA polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431701.1	West Nile virus isolate 04-214CO polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431702.1	West Nile virus isolate 04-216CO polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431703.1	West Nile virus isolate 04-218CO polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431704.1	West Nile virus isolate 04-219CO polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431705.1	West Nile virus isolate 04-233ND polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431706.1	West Nile virus isolate 04-236NM polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431707.1	West Nile virus isolate 04-237NM polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431708.1	West Nile virus isolate 04-238CA polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431709.1	West Nile virus isolate 04-240CA polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431710.1	West Nile virus isolate 04-244CA polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431711.1	West Nile virus isolate 04-251AZ polyprotein precursor, gene, complet	41	`...................`	59	100
DQ431712.1	West Nile virus isolate 04-252AZ polyprotein precursor, gene, complet	41	`...................`	59	100
DQ786572.1	West Nile virus isolate France 405/04 polyprotein gene, complete cds	113	`...................`	131	100
DQ786573.1	West Nile virus isolate France 407/04 polyprotein gene, complete cds	113	`...................`	131	100
DQ666448.1	West Nile virus isolate BSL5-2004, complete genome	137	`...................`	155	100
DQ666449.1	West Nile virus isolate GCTX1-2005, complete genome	137	`...................`	155	100
DQ666450.1	West Nile virus isolate GCTX2-2005, complete genome	137	`...................`	155	100
DQ666451.1	West Nile virus isolate BSL13-2005, complete genome	137	`...................`	155	100
DQ666452.1	West Nile virus isolate BSL2-2005, complete genome	137	`...................`	155	100
DQ176636.2	West Nile virus strain Madagascar-AnMg798, complete genome	136	`...................`	154	100
CS543188.1	Sequence 1 from Patent WO2007015783	137	`...................`	155	100
CS568914.1	Sequence 1 from Patent WO2006029300	137	`...................`	155	100
CS568916.1	Sequence 3 from Patent WO2006029300	137	`...................`	155	100
CS568917.1	Sequence 4 from Patent WO2006029300	137	`...................`	155	100
CS568918.1	Sequence 5 from Patent WO2006029300	137	`...................`	155	100
CS568919.1	Sequence 6 from Patent WO2006029300	137	`...................`	155	100
EF571854.1	West Nile virus strain 385-99, complete genome	137	`...................`	155	100
EF429197.1	West Nile virus SPU116/89, complete genome	137	`...................`	155	100
EF429198.1	West Nile virus SA93/01, complete genome	137	`...................`	155	100
EF429199.1	West Nile virus SA381/00, complete genome	137	`...................`	155	100
EF429200.1	West Nile virus H442, complete genome	137	`...................`	155	100
EU068667.1	West Nile virus isolate SPU116-89 polyprotein gene, complete cds	41	`...................`	59	100
EU081844.1	West Nile virus strain Egypt 101, complete genome	137	`...................`	155	100
EF530047.1	West Nile virus strain 3356.2.1.1, complete genome	137	`...................`	155	100
EF657887.1	West Nile virus strain 3356K VP2, complete genome	137	`...................`	155	100
EU155484.1	West Nile virus strain OK03, complete genome	137	`...................`	155	100
AM404308.1	West Nile virus strain PTRoxo complete genome, genomic RNA, strain PT	112	`...................`	130	100
FJ151394.1	West Nile virus strain NY99-crow-V76/1, complete genome	137	`...................`	155	100
FJ411043.1	West Nile virus isolate NY99iso-1, complete genome	137	`...................`	155	100
FJ425721.1	West Nile virus isolate Reb_VLG_07_H polyprotein gene, complete cds	104	`...................`	122	100
FJ483548.1	West Nile virus strain 15217, complete genome	137	`...................`	155	100
FJ483549.1	West Nile virus strain 15803, complete genome	137	`...................`	155	100
FJ527738.1	West Nile virus strain LSU-AR01, complete genome	137	`...................`	155	100
AJ965626.2	West Nile virus strain PT6.16 polyprotein, genomic RNA	112	`...................`	130	100
AJ965628.2	West Nile virus strain PT5.2 polyprotein, genomic RNA, complete genom	112	`...................`	130	100
GQ379156.1	West Nile virus strain FL2001 crow 67030, complete genome	137	`...................`	155	100
GQ379157.1	West Nile virus strain DB080718-14, complete genome	137	`...................`	155	100
GQ379158.1	West Nile virus strain ORCO0559-07, complete genome	137	`...................`	155	100
GQ379159.1	West Nile virus strain JPW080813-01, complete genome	137	`...................`	155	100
GQ379160.1	West Nile virus strain ArEq001, complete genome	137	`...................`	155	100
GQ379161.1	West Nile virus strain ArEq003, complete genome	137	`...................`	155	100
GU011992.2	West Nile virus strain Ita09, complete genome	137	`...................`	155	100
GU827998.1	West Nile virus isolate Bird114 polyprotein gene, complete cds	83	`...................`	101	100
GU827999.1	West Nile virus isolate Bird1576 polyprotein gene, complete cds	102	`...................`	120	100
GU828000.1	West Nile virus isolate Bird1175 polyprotein gene, complete cds	89	`...................`	107	100
GU828001.1	West Nile virus isolate v4380 polyprotein gene, complete cds	89	`...................`	107	100
GU828002.1	West Nile virus isolate v4095 polyprotein gene, complete cds	88	`...................`	106	100
GU828003.1	West Nile virus isolate Bird1881 polyprotein gene, complete cds	90	`...................`	108	100
GU828004.1	West Nile virus isolate Bird1519 polyprotein gene, complete cds	90	`...................`	108	100
HM488177.1	West Nile virus isolate WNV-1/US/BID-V4336/2002, complete genome	137	`...................`	155	100
HM488178.1	West Nile virus isolate WNV-1/US/BID-V4337/2002, complete genome	130	`...................`	148	100
HM488179.1	West Nile virus isolate WNV-1/US/BID-V4338/2002, complete genome	137	`...................`	155	100
HM488180.1	West Nile virus isolate WNV-1/US/BID-V4339/2002, complete genome	138	`...................`	156	100
HM488181.1	West Nile virus isolate WNV-1/US/BID-V4340/2002, complete genome	137	`...................`	155	100
HM488182.1	West Nile virus isolate WNV-1/US/BID-V4341/2002, complete genome	137	`...................`	155	100
HM488183.1	West Nile virus isolate WNV-1/US/BID-V4345/2002, complete genome	137	`...................`	155	100
HM488184.1	West Nile virus isolate WNV-1/US/BID-V4346/2002, complete genome	137	`...................`	155	100
HM488185.1	West Nile virus isolate WNV-1/US/BID-V4347/2003, complete genome	136	`...................`	154	100
HM488186.1	West Nile virus isolate WNV-1/US/BID-V4350/2003, complete genome	137	`...................`	155	100
HM488187.1	West Nile virus isolate WNV-1/US/BID-V4351/2003, complete genome	136	`...................`	154	100
HM488188.1	West Nile virus isolate WNV-1/US/BID-V4353/2004, complete genome	137	`...................`	155	100
HM488189.1	West Nile virus isolate WNV-1/US/BID-V4367/2004, complete genome	137	`...................`	155	100
HM488190.1	West Nile virus isolate WNV-1/US/BID-V4368/2004, complete genome	133	`...................`	151	100
HM488191.1	West Nile virus isolate WNV-1/US/BID-V4369/2004, complete genome	137	`...................`	155	100
HM488192.1	West Nile virus isolate WNV-1/US/BID-V4371/2005, complete genome	137	`...................`	155	100
HM488193.1	West Nile virus isolate WNV-1/US/BID-V4373/2005, complete genome	137	`...................`	155	100
HM488195.1	West Nile virus isolate WNV-1/US/BID-V4375/2005, complete genome	137	`...................`	155	100
HM488194.1	West Nile virus isolate WNV-1/US/BID-V4374/2005, complete genome	180	`...................`	198	100
HM488196.1	West Nile virus isolate WNV-1/US/BID-V4376/2005, complete genome	137	`...................`	155	100
HM488197.1	West Nile virus isolate WNV-1/US/BID-V4377/2005, complete genome	136	`...................`	154	100
HM488198.1	West Nile virus isolate WNV-1/US/BID-V4378/2005, complete genome	133	`...................`	151	100
HM488199.1	West Nile virus isolate WNV-1/US/BID-V4090/2007, complete genome	137	`...................`	155	100
HM488200.1	West Nile virus isolate WNV-1/US/BID-V4092/2007, complete genome	136	`...................`	154	100
HM488201.1	West Nile virus isolate WNV-1/US/BID-V4093/2007, complete genome	181	`...................`	199	100
HM488202.1	West Nile virus isolate WNV-1/US/BID-V4094/2007, complete genome	137	`...................`	155	100
HM488203.1	West Nile virus isolate WNV-1/US/BID-V4096/2008, complete genome	137	`...................`	155	100
HM488204.1	West Nile virus isolate WNV-1/US/BID-V4098/2008, complete genome	137	`...................`	155	100
HM488205.1	West Nile virus isolate WNV-1/US/BID-V4099/2008, complete genome	137	`...................`	155	100
HM488206.1	West Nile virus isolate WNV-1/US/BID-V4100/2008, complete genome	137	`...................`	155	100
HM488207.1	West Nile virus isolate WNV-1/US/BID-V4101/2008, complete genome	137	`...................`	155	100
HM488208.1	West Nile virus isolate WNV-1/US/BID-V4204/2002, complete genome	163	`...................`	181	100
HM488209.1	West Nile virus isolate WNV-1/US/BID-V4564/2003, complete genome	137	`...................`	155	100
HM488210.1	West Nile virus isolate WNV-1/US/BID-V4565/2003, complete genome	137	`...................`	155	100
HM488211.1	West Nile virus isolate WNV-1/US/BID-V4566/2003, complete genome	137	`...................`	155	100
HM488212.1	West Nile virus isolate WNV-1/US/BID-V4567/2003, complete genome	180	`...................`	198	100
HM488213.1	West Nile virus isolate WNV-1/US/BID-V4571/2003, complete genome	137	`...................`	155	100
HM488214.1	West Nile virus isolate WNV-1/US/BID-V4572/2003, complete genome	137	`...................`	155	100
HM488215.1	West Nile virus isolate WNV-1/US/BID-V4573/2003, complete genome	137	`...................`	155	100
HM488216.1	West Nile virus isolate WNV-1/US/BID-V4574/2003, complete genome	137	`...................`	155	100
HM488217.1	West Nile virus isolate WNV-1/US/BID-V4581/2003, complete genome	137	`...................`	155	100
HM488218.1	West Nile virus isolate WNV-1/US/BID-V4583/2003, complete genome	181	`...................`	199	100
HM488219.1	West Nile virus isolate WNV-1/US/BID-V4585/2003, complete genome	179	`...................`	197	100
HM488220.1	West Nile virus isolate WNV-1/US/BID-V4586/2003, complete genome	137	`...................`	155	100
HM488221.1	West Nile virus isolate WNV-1/US/BID-V4593/2003, complete genome	177	`...................`	195	100
HM488222.1	West Nile virus isolate WNV-1/US/BID-V4599/2003, complete genome	137	`...................`	155	100
HM488223.1	West Nile virus isolate WNV-1/US/BID-V4603/2003, complete genome	135	`...................`	153	100
HM488224.1	West Nile virus isolate WNV-1/US/BID-V4604/2003, complete genome	137	`...................`	155	100
HM488225.1	West Nile virus isolate WNV-1/US/BID-V4605/2003, complete genome	136	`...................`	154	100
HM488226.1	West Nile virus isolate WNV-1/US/BID-V4607/2003, complete genome	137	`...................`	155	100
HM488227.1	West Nile virus isolate WNV-1/US/BID-V4608/2003, complete genome	171	`...................`	189	100
HM488228.1	West Nile virus isolate WNV-1/US/BID-V4609/2003, complete genome	137	`...................`	155	100
HM488229.1	West Nile virus isolate WNV-1/US/BID-V4610/2003, complete genome	181	`...................`	199	100
HM488230.1	West Nile virus isolate WNV-1/US/BID-V4612/2003, complete genome	137	`...................`	155	100
HM488231.1	West Nile virus isolate WNV-1/US/BID-V4613/2003, complete genome	137	`...................`	155	100
HM488232.1	West Nile virus isolate WNV-1/US/BID-V4614/2003, complete genome	137	`...................`	155	100
HM488233.1	West Nile virus isolate WNV-1/US/BID-V4616/2003, complete genome	137	`...................`	155	100
HM488234.1	West Nile virus isolate WNV-1/US/BID-V4617/2003, complete genome	137	`...................`	155	100
HM488235.1	West Nile virus isolate WNV-1/US/BID-V4619/2003, complete genome	137	`...................`	155	100
HM488236.1	West Nile virus isolate WNV-1/US/BID-V4700/2003, complete genome	128	`...................`	146	100
HM488237.1	West Nile virus isolate WNV-1/US/BID-V4622/2008, complete genome	137	`...................`	155	100
HM488238.1	West Nile virus isolate WNV-1/US/BID-V4623/2008, complete genome	137	`...................`	155	100
HM488239.1	West Nile virus isolate WNV-1/US/BID-V4624/2008, complete genome	137	`...................`	155	100
HM488240.1	West Nile virus isolate WNV-1/US/BID-V4627/2008, complete genome	137	`...................`	155	100
HM488241.1	West Nile virus isolate WNV-1/US/BID-V4628/2008, complete genome	137	`...................`	155	100
HM488242.1	West Nile virus isolate WNV-1/US/BID-V4631/2008, complete genome	133	`...................`	151	100
HM488243.1	West Nile virus isolate WNV-1/US/BID-V4632/2008, complete genome	137	`...................`	155	100
HM488244.1	West Nile virus isolate WNV-1/US/BID-V4634/2008, complete genome	137	`...................`	155	100
HM488245.1	West Nile virus isolate WNV-1/US/BID-V4635/2008, complete genome	137	`...................`	155	100
HM488246.1	West Nile virus isolate WNV-1/US/BID-V4689/2001, complete genome	130	`...................`	148	100
HM488247.1	West Nile virus isolate WNV-1/US/BID-V4691/2001, complete genome	128	`...................`	146	100
HM488248.1	West Nile virus isolate WNV-1/US/BID-V4694/2001, complete genome	128	`...................`	146	100
HM488249.1	West Nile virus isolate WNV-1/US/BID-V4696/2001, complete genome	128	`...................`	146	100
HM488250.1	West Nile virus isolate WNV-1/US/BID-V4717/2003, complete genome	128	`...................`	146	100
HM488251.1	West Nile virus isolate WNV-1/US/BID-V4719/2003, complete genome	128	`...................`	146	100
HM488252.1	West Nile virus isolate WNV-1/US/BID-V4805/2005, complete genome	128	`...................`	146	100
HM488253.1	West Nile virus isolate WNV-1/US/BID-V4553/2006, complete genome	152	`...................`	170	100
HM488254.1	West Nile virus isolate WNV-1/US/BID-V4559/2007, complete genome	137	`...................`	155	100
HM756648.1	West Nile virus isolate WNV-1/US/BID-V4205/2002, complete genome	137	`...................`	155	100
HM756649.1	West Nile virus isolate WNV-1/US/BID-V4354/2006, complete genome	137	`...................`	155	100
HM756650.1	West Nile virus isolate WNV-1/US/BID-V4582/2003, complete genome	137	`...................`	155	100
HM756651.1	West Nile virus isolate WNV-1/US/BID-V4584/2003, complete genome	132	`...................`	150	100
HM756652.1	West Nile virus isolate WNV-1/US/BID-V4587/2003, complete genome	135	`...................`	153	100
HM756653.1	West Nile virus isolate WNV-1/US/BID-V4588/2003, complete genome	137	`...................`	155	100
HM756654.1	West Nile virus isolate WNV-1/US/BID-V4598/2003, complete genome	137	`...................`	155	100
HM756656.1	West Nile virus isolate WNV-1/US/BID-V4615/2003, complete genome	137	`...................`	155	100
HM756657.1	West Nile virus isolate WNV-1/US/BID-V4685/2003, complete genome	128	`...................`	146	100
HM756658.1	West Nile virus isolate WNV-1/US/BID-V4686/2003, complete genome	128	`...................`	146	100
HM756659.1	West Nile virus isolate WNV-1/US/BID-V4687/2003, complete genome	128	`...................`	146	100
HM756660.1	West Nile virus isolate WNV-1/US/BID-V4097/2008, complete genome	134	`...................`	152	100
HM756661.1	West Nile virus isolate WNV-1/US/BID-V4692/2001, complete genome	129	`...................`	147	100
HM756662.1	West Nile virus isolate WNV-1/US/BID-V4693/2001, complete genome	128	`...................`	146	100
HM756663.1	West Nile virus isolate WNV-1/US/BID-V4697/2001, complete genome	128	`...................`	146	100
HM756664.1	West Nile virus isolate WNV-1/US/BID-V4701/2002, complete genome	128	`...................`	146	100
HM756665.1	West Nile virus isolate WNV-1/US/BID-V4709/2002, complete genome	128	`...................`	146	100
HM756666.1	West Nile virus isolate WNV-1/US/BID-V4711/2003, complete genome	130	`...................`	148	100
HM756667.1	West Nile virus isolate WNV-1/US/BID-V4712/2003, complete genome	129	`...................`	147	100
HM756668.1	West Nile virus isolate WNV-1/US/BID-V4716/2003, complete genome	128	`...................`	146	100
HM756669.1	West Nile virus isolate WNV-1/US/BID-V4718/2003, complete genome	128	`...................`	146	100
HM756670.1	West Nile virus isolate WNV-1/US/BID-V4720/2003, complete genome	128	`...................`	146	100
HM756671.1	West Nile virus isolate WNV-1/US/BID-V4798/2004, complete genome	128	`...................`	146	100
HM756672.1	West Nile virus isolate WNV-1/US/BID-V4799/2004, complete genome	128	`...................`	146	100
HM756673.1	West Nile virus isolate WNV-1/US/BID-V4801/2004, complete genome	128	`...................`	146	100
HM756675.1	West Nile virus isolate WNV-1/US/BID-V4806/2005, complete genome	128	`...................`	146	100
HM756676.1	West Nile virus isolate WNV-1/US/BID-V4349/2003, complete genome	136	`...................`	154	100
HM756677.1	West Nile virus isolate WNV-1/US/BID-V4530/2005, complete genome	137	`...................`	155	100
HM756678.1	West Nile virus isolate WNV-1/US/BID-V4095/2007, complete genome	137	`...................`	155	100
HM488114.1	West Nile virus isolate WNV-1/US/BID-V4102/2002, complete genome	137	`...................`	155	100
HM488115.1	West Nile virus isolate WNV-1/US/BID-V4103/2005, complete genome	137	`...................`	155	100
HM488116.1	West Nile virus isolate WNV-1/US/BID-V4104/2005, complete genome	171	`...................`	189	100
HM488117.1	West Nile virus isolate WNV-1/US/BID-V4105/2005, complete genome	137	`...................`	155	100
HM488118.1	West Nile virus isolate WNV-1/US/BID-V4107/2005, complete genome	137	`...................`	155	100
HM488119.1	West Nile virus isolate WNV-1/US/BID-V4108/2005, complete genome	137	`...................`	155	100
HM488120.1	West Nile virus isolate WNV-1/US/BID-V4109/2005, complete genome	137	`...................`	155	100
HM488121.1	West Nile virus isolate WNV-1/US/BID-V4110/2005, complete genome	137	`...................`	155	100
HM488125.1	West Nile virus isolate WNV-1/US/BID-V4186/1999, complete genome	136	`...................`	154	100
HM488126.1	West Nile virus isolate WNV-1/US/BID-V4187/1999, complete genome	137	`...................`	155	100
HM488127.1	West Nile virus isolate WNV-1/US/BID-V4188/1999, complete genome	141	`...................`	159	100
HM488128.1	West Nile virus isolate WNV-1/US/BID-V4189/1999, complete genome	132	`...................`	150	100
HM488129.1	West Nile virus isolate WNV-1/US/BID-V4191/2000, complete genome	137	`...................`	155	100
HM488130.1	West Nile virus isolate WNV-1/US/BID-V4192/2000, complete genome	137	`...................`	155	100
HM488131.1	West Nile virus isolate WNV-1/US/BID-V4193/2000, complete genome	136	`...................`	154	100
HM488132.1	West Nile virus isolate WNV-1/US/BID-V4194/2000, complete genome	137	`...................`	155	100
HM488133.1	West Nile virus isolate WNV-1/US/BID-V4195/2001, complete genome	137	`...................`	155	100
HM488134.1	West Nile virus isolate WNV-1/US/BID-V4198/2001, complete genome	137	`...................`	155	100
HM488135.1	West Nile virus isolate WNV-1/US/BID-V4199/2001, complete genome	137	`...................`	155	100
HM488136.1	West Nile virus isolate WNV-1/US/BID-V4200/2001, complete genome	137	`...................`	155	100
HM488137.1	West Nile virus isolate WNV-1/US/BID-V4202/2002, complete genome	137	`...................`	155	100
HM488138.1	West Nile virus isolate WNV-1/US/BID-V4207/2003, complete genome	137	`...................`	155	100
HM488139.1	West Nile virus isolate WNV-1/US/BID-V4208/2003, complete genome	134	`...................`	152	100
HM488140.1	West Nile virus isolate WNV-1/US/BID-V4210/2003, complete genome	137	`...................`	155	100
HM488141.1	West Nile virus isolate WNV-1/US/BID-V4212/2003, complete genome	136	`...................`	154	100
HM488142.1	West Nile virus isolate WNV-1/US/BID-V4214/2004, complete genome	134	`...................`	152	100
HM488143.1	West Nile virus isolate WNV-1/US/BID-V4215/2004, complete genome	137	`...................`	155	100
HM488144.1	West Nile virus isolate WNV-1/US/BID-V4216/2004, complete genome	137	`...................`	155	100
HM488145.1	West Nile virus isolate WNV-1/US/BID-V4217/2004, complete genome	137	`...................`	155	100
HM488146.1	West Nile virus isolate WNV-1/US/BID-V4218/2004, complete genome	137	`...................`	155	100
HM488147.1	West Nile virus isolate WNV-1/US/BID-V4219/2004, complete genome	137	`...................`	155	100
HM488148.1	West Nile virus isolate WNV-1/US/BID-V4220/2004, complete genome	137	`...................`	155	100
HM488149.1	West Nile virus isolate WNV-1/US/BID-V4223/2005, complete genome	137	`...................`	155	100
HM488150.1	West Nile virus isolate WNV-1/US/BID-V4224/2005, complete genome	137	`...................`	155	100
HM488151.1	West Nile virus isolate WNV-1/US/BID-V4225/2005, complete genome	137	`...................`	155	100
HM488152.1	West Nile virus isolate WNV-1/US/BID-V4226/2005, complete genome	137	`...................`	155	100
HM488153.1	West Nile virus isolate WNV-1/US/BID-V4227/2005, complete genome	136	`...................`	154	100
HM488154.1	West Nile virus isolate WNV-1/US/BID-V4228/2005, complete genome	141	`...................`	159	100
HM488155.1	West Nile virus isolate WNV-1/US/BID-V4229/2006, complete genome	137	`...................`	155	100
HM488156.1	West Nile virus isolate WNV-1/US/BID-V4230/2006, complete genome	137	`...................`	155	100
HM488157.1	West Nile virus isolate WNV-1/US/BID-V4231/2006, complete genome	137	`...................`	155	100
HM488158.1	West Nile virus isolate WNV-1/US/BID-V4232/2006, complete genome	136	`...................`	154	100
HM488159.1	West Nile virus isolate WNV-1/US/BID-V4233/2006, complete genome	137	`...................`	155	100
HM488160.1	West Nile virus isolate WNV-1/US/BID-V4355/2006, complete genome	135	`...................`	153	100
HM488161.1	West Nile virus isolate WNV-1/US/BID-V4356/2007, complete genome	137	`...................`	155	100
HM488162.1	West Nile virus isolate WNV-1/US/BID-V4357/2007, complete genome	130	`...................`	148	100
HM488163.1	West Nile virus isolate WNV-1/US/BID-V4359/2007, complete genome	137	`...................`	155	100
HM488164.1	West Nile virus isolate WNV-1/US/BID-V4360/2007, complete genome	137	`...................`	155	100
HM488165.1	West Nile virus isolate WNV-1/US/BID-V4361/2007, complete genome	137	`...................`	155	100
HM488166.1	West Nile virus isolate WNV-1/US/BID-V4362/2008, complete genome	152	`...................`	170	100
HM488167.1	West Nile virus isolate WNV-1/US/BID-V4363/2008, complete genome	137	`...................`	155	100
HM488168.1	West Nile virus isolate WNV-1/US/BID-V4364/2008, complete genome	137	`...................`	155	100
HM488169.1	West Nile virus isolate WNV-1/US/BID-V4365/2008, complete genome	137	`...................`	155	100
HM488170.1	West Nile virus isolate WNV-1/US/BID-V4366/2008, complete genome	137	`...................`	155	100
HM488171.1	West Nile virus isolate WNV-1/US/BID-V4560/2003, complete genome	138	`...................`	156	100
HM488172.1	West Nile virus isolate WNV-1/US/BID-V4561/2003, complete genome	179	`...................`	197	100
HM488173.1	West Nile virus isolate WNV-1/US/BID-V4562/2003, complete genome	182	`...................`	200	100
HM488174.1	West Nile virus isolate WNV-1/US/BID-V4563/2003, complete genome	179	`...................`	197	100
HM488175.1	West Nile virus isolate WNV-1/US/BID-V4569/2003, complete genome	180	`...................`	198	100
HM488176.1	West Nile virus isolate WNV-1/US/BID-V4575/2003, complete genome	181	`...................`	199	100
HM488122.1	West Nile virus isolate WNV-1/CTFS/BID-V4111/2006, complete genome	133	`...................`	151	100
HM488123.1	West Nile virus isolate WNV-1/CTFS/BID-V4112/2006, complete genome	136	`...................`	154	100
HM488124.1	West Nile virus isolate WNV-1/CTFS/BID-V4113/2006, complete genome	137	`...................`	155	100
HM051416.1	West Nile virus isolate twn9, complete genome	137	`...................`	155	100
HQ596519.1	West Nile virus strain New York 99 isolate 4132, complete genome	137	`...................`	155	100
HQ671696.1	West Nile virus isolate WNV-1/US/BID-V4196/2001, complete genome	137	`...................`	155	100
HQ671697.1	West Nile virus isolate WNV-1/US/BID-V4197/2001, complete genome	137	`...................`	155	100
HQ671698.1	West Nile virus isolate WNV-1/US/BID-V4203/2002, complete genome	137	`...................`	155	100
HQ671699.1	West Nile virus isolate WNV-1/US/BID-V4206/2002, complete genome	169	`...................`	187	100
HQ671700.1	West Nile virus isolate WNV-1/US/BID-V4576/2003, complete genome	180	`...................`	198	100
HQ671701.1	West Nile virus isolate WNV-1/US/BID-V4590/2003, complete genome	132	`...................`	150	100
HQ671702.1	West Nile virus isolate WNV-1/US/BID-V4595/2003, complete genome	177	`...................`	195	100
HQ671703.1	West Nile virus isolate WNV-1/US/BID-V4611/2003, complete genome	128	`...................`	146	100
HQ671704.1	West Nile virus isolate WNV-1/US/BID-V4618/2003, complete genome	137	`...................`	155	100
HQ671705.1	West Nile virus isolate WNV-1/US/BID-V4620/2003, complete genome	128	`...................`	146	100
HQ671706.1	West Nile virus isolate WNV-1/US/BID-V4898/1999, complete genome	129	`...................`	147	100
HQ671707.1	West Nile virus isolate WNV-1/US/BID-V4899/1999, complete genome	128	`...................`	146	100
HQ671708.1	West Nile virus isolate WNV-1/US/BID-V4900/2000, complete genome	128	`...................`	146	100
HQ671709.1	West Nile virus isolate WNV-1/US/BID-V4901/2000, complete genome	128	`...................`	146	100
HQ671710.1	West Nile virus isolate WNV-1/US/BID-V4902/2000, complete genome	128	`...................`	146	100
HQ671711.1	West Nile virus isolate WNV-1/US/BID-V4903/2000, complete genome	128	`...................`	146	100
HQ671712.1	West Nile virus isolate WNV-1/US/BID-V4904/2000, complete genome	128	`...................`	146	100
HQ671713.1	West Nile virus isolate WNV-1/US/BID-V4905/2001, complete genome	128	`...................`	146	100
HQ671714.1	West Nile virus isolate WNV-1/US/BID-V4906/2001, complete genome	128	`...................`	146	100
HQ671715.1	West Nile virus isolate WNV-1/US/BID-V4908/2001, complete genome	128	`...................`	146	100
HQ671716.1	West Nile virus isolate WNV-1/US/BID-V4909/2001, complete genome	128	`...................`	146	100
HQ671717.1	West Nile virus isolate WNV-1/US/BID-V4910/2001, complete genome	129	`...................`	147	100
HQ671718.1	West Nile virus isolate WNV-1/US/BID-V4911/2001, complete genome	128	`...................`	146	100
HQ671719.1	West Nile virus isolate WNV-1/US/BID-V4912/2001, complete genome	128	`...................`	146	100
HQ671720.1	West Nile virus isolate WNV-1/US/BID-V4913/2002, complete genome	128	`...................`	146	100
HQ671721.1	West Nile virus isolate WNV-1/US/BID-V4625/2008, complete genome	137	`...................`	155	100
HQ671722.1	West Nile virus isolate WNV-1/US/BID-V4704/2002, complete genome	128	`...................`	146	100
HQ671723.1	West Nile virus isolate WNV-1/US/BID-V4715/2003, complete genome	128	`...................`	146	100
HQ671724.1	West Nile virus isolate WNV-1/US/BID-V4883/2005, complete genome	128	`...................`	146	100
HQ671725.1	West Nile virus isolate WNV-1/US/BID-V4885/2005, complete genome	128	`...................`	146	100
HQ671726.1	West Nile virus isolate WNV-1/US/BID-V4887/2005, complete genome	128	`...................`	146	100
HQ671727.1	West Nile virus isolate WNV-1/US/BID-V4889/2006, complete genome	68	`...................`	86	100
HQ671728.1	West Nile virus isolate WNV-1/US/BID-V4891/2006, complete genome	128	`...................`	146	100
HQ671729.1	West Nile virus isolate WNV-1/US/BID-V4892/2006, complete genome	128	`...................`	146	100
HQ671730.1	West Nile virus isolate WNV-1/US/BID-V4897/2007, complete genome	128	`...................`	146	100
HQ705659.1	West Nile virus isolate WNV-1/US/BID-V4209/2003, complete genome	48	`...................`	66	100
HQ705660.1	West Nile virus isolate WNV-1/US/BID-V4714/2003, complete genome	127	`...................`	145	100
HQ705669.1	West Nile virus isolate WNV-1/US/BID-V4342/2002, complete genome	137	`...................`	155	100
HQ671668.1	West Nile virus isolate WNV-1/Mus/BID-V4728/spleen, complete genome	137	`...................`	155	100
HQ671669.1	West Nile virus isolate WNV-1/Mus/BID-V4730/spleen, complete genome	179	`...................`	197	100
HQ671670.1	West Nile virus isolate WNV-1/Mus/BID-V4731/spleen, complete genome	181	`...................`	199	100
HQ671671.1	West Nile virus isolate WNV-1/Mus/BID-V4920/spleen, complete genome	129	`...................`	147	100
HQ671672.1	West Nile virus isolate WNV-1/Mus/BID-V4921/spleen, complete genome	128	`...................`	146	100
HQ671673.1	West Nile virus isolate WNV-1/Mus/BID-V4924/spleen, complete genome	129	`...................`	147	100
HQ671674.1	West Nile virus isolate WNV-1/Mus/BID-V4925/spleen, complete genome	128	`...................`	146	100
HQ671675.1	West Nile virus isolate WNV-1/Mus/BID-V4926/spleen, complete genome	128	`...................`	146	100
HQ671676.1	West Nile virus isolate WNV-1/Mus/BID-V4937/spleen, complete genome	127	`...................`	145	100
HQ671677.1	West Nile virus isolate WNV-1/Mus/BID-V4938/spleen, complete genome	136	`...................`	154	100
HQ671678.1	West Nile virus isolate WNV-1/Mus/BID-V4940/spleen, complete genome	138	`...................`	156	100
HQ671679.1	West Nile virus isolate WNV-1/Mus/BID-V4969/serum, complete genome	104	`...................`	122	100
HQ671680.1	West Nile virus isolate WNV-1/Mus/BID-V4981/serum, complete genome	104	`...................`	122	100
HQ671681.1	West Nile virus isolate WNV-1/Mus/BID-V4985/spleen, complete genome	127	`...................`	145	100
HQ671682.1	West Nile virus isolate WNV-1/Mus/BID-V4986/spleen, complete genome	119	`...................`	137	100
HQ671683.1	West Nile virus isolate WNV-1/Mus/BID-V5006/brain, complete genome	104	`...................`	122	100
HQ671684.1	West Nile virus isolate WNV-1/Mus/BID-V5007/brain, complete genome	104	`...................`	122	100
HQ671685.1	West Nile virus isolate WNV-1/Mus/BID-V5008/brain, complete genome	104	`...................`	122	100
HQ671686.1	West Nile virus isolate WNV-1/Mus/BID-V5017/brain, complete genome	104	`...................`	122	100
HQ671687.1	West Nile virus isolate WNV-1/Culex/BID-V4161/legs, complete genome	138	`...................`	156	100
HQ671688.1	West Nile virus isolate WNV-1/Culex/BID-V4165/legs, complete genome	136	`...................`	154	100
HQ671689.1	West Nile virus isolate WNV-1/Culex/BID-V4174/legs, complete genome	136	`...................`	154	100
HQ671690.1	West Nile virus isolate WNV-1/Culex/BID-V4180/midgut, complete genome	121	`...................`	139	100
HQ671691.1	West Nile virus isolate WNV-1/Gallus/BID-V4958/kidney, complete genom	157	`...................`	175	100
HQ671692.1	West Nile virus isolate WNV-1/Gallus/BID-V4959/kidney, complete genom	140	`...................`	158	100
HQ671693.1	West Nile virus isolate WNV-1/Gallus/BID-V4961/kidney, complete genom	129	`...................`	147	100
HQ671694.1	West Nile virus isolate WNV-1/Gallus/BID-V4963/kidney, complete genom	128	`...................`	146	100
HQ671695.1	West Nile virus isolate WNV-1/Gallus/BID-V5112/skin, complete genome	104	`...................`	122	100
HQ671731.1	West Nile virus isolate WNV-1/Culex/BID-V4171/midgut, complete genome	137	`...................`	155	100
HQ671732.1	West Nile virus isolate WNV-1/Mus/BID-V5000/brain, complete genome	111	`...................`	129	100
HQ671733.1	West Nile virus isolate WNV-1/Mus/BID-V5004/brain, complete genome	104	`...................`	122	100
HQ705663.1	West Nile virus isolate WNV-1/Mus/BID-V4936/spleen, complete genome	128	`...................`	146	100
HQ705670.1	West Nile virus isolate WNV-1/Culex/BID-V4163/legs, complete genome	137	`...................`	155	100
HQ705671.1	West Nile virus isolate WNV-1/Culex/BID-V4166/midgut, complete genome	137	`...................`	155	100
HQ705672.1	West Nile virus isolate WNV-1/Culex/BID-V4168/legs, complete genome	137	`...................`	155	100
HQ705673.1	West Nile virus isolate WNV-1/Culex/BID-V4169/midgut, complete genome	137	`...................`	155	100
HQ705674.1	West Nile virus isolate WNV-1/Culex/BID-V4173/midgut, complete genome	137	`...................`	155	100
HQ705675.1	West Nile virus isolate WNV-1/Culex/BID-V4184/legs, complete genome	137	`...................`	155	100
HQ705676.1	West Nile virus isolate WNV-1/Mus/BID-V4971/serum, complete genome	103	`...................`	121	100
HQ705677.1	West Nile virus isolate WNV-1/Gallus/BID-V4960/kidney, complete genom	128	`...................`	146	100
HQ705678.1	West Nile virus isolate WNV-1/Gallus/BID-V4962/kidney, complete genom	129	`...................`	147	100
HQ891009.1	West Nile virus isolate WNV-1/Mus/BID-V4980/serum, complete genome	104	`...................`	122	100
HQ891010.1	West Nile virus isolate WNV-1/Mus/BID-V4987/spleen, complete genome	104	`...................`	122	100
HQ891011.1	West Nile virus isolate WNV-1/Mus/BID-V4993/brain, complete genome	104	`...................`	122	100
HQ891012.1	West Nile virus isolate WNV-1/Mus/BID-V5118/serum, complete genome	104	`...................`	122	100
HQ891013.1	West Nile virus isolate WNV-1/Mus/BID-V5122/serum, complete genome	104	`...................`	122	100
JF357958.1	West Nile virus isolate WNV-1/Mus/BID-V4997/brain, complete genome	133	`...................`	151	100
JF357959.1	West Nile virus isolate WNV-1/Mus/BID-V4999/brain, complete genome	137	`...................`	155	100
JF357960.1	West Nile virus isolate WNV-1/Gallus/BID-V5109/skin, complete genome	137	`...................`	155	100
HM147822.1	West Nile virus from South Africa, complete genome	137	`...................`	155	100
HM147823.1	West Nile virus from Madagascar, complete genome	137	`...................`	155	100
HM147824.1	West Nile virus from Democratic Republic of the Congo, complete genom	137	`...................`	155	100
JF488086.1	West Nile virus isolate WNV-1/US/BID-V5176/2004, complete genome	137	`...................`	155	100
JF488087.1	West Nile virus isolate WNV-1/US/BID-V5177/2004, complete genome	137	`...................`	155	100
JF488088.1	West Nile virus isolate WNV-1/US/BID-V5178/2004, complete genome	137	`...................`	155	100
JF488089.1	West Nile virus isolate WNV-1/US/BID-V5179/2004, complete genome	137	`...................`	155	100
JF488090.1	West Nile virus isolate WNV-1/US/BID-V5180/2004, complete genome	150	`...................`	168	100
JF488091.1	West Nile virus isolate WNV-1/US/BID-V5181/2004, complete genome	137	`...................`	155	100
JF488092.1	West Nile virus isolate WNV-1/US/BID-V5182/2004, complete genome	137	`...................`	155	100
JF488093.1	West Nile virus isolate WNV-1/US/BID-V5188/2005, complete genome	137	`...................`	155	100
JF488094.1	West Nile virus isolate WNV-1/US/BID-V5150/2004, complete genome	137	`...................`	155	100
JF488095.1	West Nile virus isolate WNV-1/US/BID-V5157/2009, complete genome	137	`...................`	155	100
JF488096.1	West Nile virus isolate WNV-1/US/BID-V5159/2009, complete genome	137	`...................`	155	100
JF488097.1	West Nile virus isolate WNV-1/US/BID-V5148/2007, complete genome	137	`...................`	155	100
JF730040.1	West Nile virus isolate WNV-1/Mus/BID-V4982/serum, complete genome	104	`...................`	122	100
JF730042.1	West Nile virus isolate WNV-1/US/BID-V5147/2007, complete genome	137	`...................`	155	100
JF730043.1	West Nile virus isolate WNV-1/US/BID-V5170/2002, complete genome	137	`...................`	155	100
JF784158.1	West Nile virus isolate WNV-1/Mus/BID-V4974/serum, complete genome	137	`...................`	155	100
HQ537483.1	West Nile virus isolate Nea Santa-Greece-2010, complete genome	137	`...................`	155	100
JF730041.1	West Nile virus isolate WNV-1/Mus/BID-V4729/spleen, complete genome	137	`...................`	155	100
JF899528.1	West Nile virus isolate WNV-1/US/BID-V4800/2004, complete genome	128	`...................`	146	100
JF899529.1	West Nile virus isolate WNV-1/US/BID-V4808/2005, complete genome	128	`...................`	146	100
JF899530.1	West Nile virus isolate WNV-1/Mus/BID-V4923/spleen, complete genome	128	`...................`	146	100
JF899531.1	West Nile virus isolate WNV-1/Mus/BID-V4979/serum, complete genome	138	`...................`	156	100
JF899532.1	West Nile virus isolate WNV-1/Mus/BID-V4992/brain, complete genome	137	`...................`	155	100
JF899533.1	West Nile virus isolate WNV-1/Mus/BID-V4996/brain, complete genome	146	`...................`	164	100
JF899534.1	West Nile virus isolate WNV-1/Mus/BID-V5002/brain, complete genome	137	`...................`	155	100
JF899535.1	West Nile virus isolate WNV-1/Mus/BID-V5142/brain, complete genome	104	`...................`	122	100
JF899536.1	West Nile virus isolate WNV-1/Mus/BID-V5145/brain, complete genome	116	`...................`	134	100
JF899537.1	West Nile virus isolate WNV-1/Mus/BID-V5146/brain, complete genome	137	`...................`	155	100
JF920306.1	West Nile virus isolate WNV-1/US/BID-V4597/2003, complete genome	171	`...................`	189	100
JF920307.1	West Nile virus isolate WNV-1/US/BID-V4907/2001, complete genome	128	`...................`	146	100
JF920728.1	West Nile virus isolate WNV-1/US/BID-V4568/2003, complete genome	137	`...................`	155	100
JF920729.1	West Nile virus isolate WNV-1/US/BID-V5196/2006, complete genome	137	`...................`	155	100
JF920730.1	West Nile virus isolate WNV-1/US/BID-V5197/2006, complete genome	136	`...................`	154	100
JF920731.1	West Nile virus isolate WNV-1/US/BID-V5201/2006, complete genome	136	`...................`	154	100
JF920732.1	West Nile virus isolate WNV-1/US/BID-V5202/2006, complete genome	137	`...................`	155	100
JF920734.1	West Nile virus isolate WNV-1/US/BID-V5204/2006, complete genome	137	`...................`	155	100
JF920735.1	West Nile virus isolate WNV-1/US/BID-V5205/2006, complete genome	136	`...................`	154	100
JF920736.1	West Nile virus isolate WNV-1/US/BID-V5206/2006, complete genome	137	`...................`	155	100
JF920737.1	West Nile virus isolate WNV-1/US/BID-V5207/2006, complete genome	137	`...................`	155	100
JF920738.1	West Nile virus isolate WNV-1/US/BID-V5208/2007, complete genome	136	`...................`	154	100
JF920739.1	West Nile virus isolate WNV-1/US/BID-V5209/2007, complete genome	137	`...................`	155	100
JF920740.1	West Nile virus isolate WNV-1/US/BID-V5210/2007, complete genome	137	`...................`	155	100
JF920741.1	West Nile virus isolate WNV-1/US/BID-V5212/2007, complete genome	137	`...................`	155	100
JF920742.1	West Nile virus isolate WNV-1/US/BID-V5213/2007, complete genome	137	`...................`	155	100
JF920743.1	West Nile virus isolate WNV-1/US/BID-V5214/2007, complete genome	137	`...................`	155	100
JF920744.1	West Nile virus isolate WNV-1/US/BID-V5215/2007, complete genome	137	`...................`	155	100
JF920745.1	West Nile virus isolate WNV-1/US/BID-V5216/2007, complete genome	137	`...................`	155	100
JF920746.1	West Nile virus isolate WNV-1/US/BID-V5217/2007, complete genome	137	`...................`	155	100
JF920747.1	West Nile virus isolate WNV-1/US/BID-V5218/2008, complete genome	137	`...................`	155	100
JF920748.1	West Nile virus isolate WNV-1/US/BID-V5219/2008, complete genome	137	`...................`	155	100
JF920749.1	West Nile virus isolate WNV-1/US/BID-V5220/2008, complete genome	137	`...................`	155	100
JF920750.1	West Nile virus isolate WNV-1/US/BID-V5222/2008, complete genome	137	`...................`	155	100
JF920751.1	West Nile virus isolate WNV-1/US/BID-V5223/2008, complete genome	137	`...................`	155	100
JF920752.1	West Nile virus isolate WNV-1/US/BID-V5224/2008, complete genome	137	`...................`	155	100
JF920753.1	West Nile virus isolate WNV-1/US/BID-V5225/2008, complete genome	137	`...................`	155	100
JF920754.1	West Nile virus isolate WNV-1/US/BID-V5226/2008, complete genome	137	`...................`	155	100
JF920755.1	West Nile virus isolate WNV-1/US/BID-V5227/2008, complete genome	137	`...................`	155	100
JF920756.1	West Nile virus isolate WNV-1/US/BID-V5229/2008, complete genome	137	`...................`	155	100
JF920757.1	West Nile virus isolate WNV-1/US/BID-V5230/2008, complete genome	137	`...................`	155	100
JF920758.1	West Nile virus isolate WNV-1/US/BID-V5233/2009, complete genome	137	`...................`	155	100
JF920759.1	West Nile virus isolate WNV-1/US/BID-V5234/2009, complete genome	131	`...................`	149	100
JF920760.1	West Nile virus isolate WNV-1/US/BID-V5235/2009, complete genome	137	`...................`	155	100
HQ671742.1	West Nile virus isolate WNV-1/US/BID-V4343/2002, complete genome	137	`...................`	155	100
JF972636.1	West Nile virus isolate WNV-1/US/BID-V5228/2008, complete genome	137	`...................`	155	100
M12294.2	WNFCG West Nile virus RNA, complete genome	137	`...................`	155	100
DQ211652.1	West Nile virus strain NY99, complete genome	137	`...................`	155	100
AY277251.1	West Nile virus isolate LEIV-Krnd88-190, complete genome	132	`.........a.........`	150	94
AY765264.1	West Nile virus strain Rabensburg isolate 97-103, complete genome	137	`.........a.........`	155	94
DQ983578.1	West Nile virus strain FLO3-FL2-3, partial genome	117	`.............g.....`	135	94
FJ159129.1	West Nile virus isolate 101_5-06-Uu, complete genome	104	`.........a.........`	122	94
FJ159130.1	West Nile virus isolate 5_50-05-Uu, complete genome	104	`.........a.........`	122	94
FJ159131.1	West Nile virus isolate 8_1-05-Uu, complete genome	104	`.........a.........`	122	94
JF920733.1	West Nile virus isolate WNV-1/US/BID-V5203/2006, complete genome	137	`.........a.........`	155	94

VIRsiRNAdb

Database of Viral siRNA / shRNA